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Licensing
Attribution Only: This image is licensed under a Creative Commons Attribution License. View License Deed | View Legal Code
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*CIL – Cell Image Library accession number. Please use this to reference an image.

CIL:56187*
Description

Scan 10_H_CA_D -- The dataset consists of 951 tissue section scans taken from 167 H&E-stained whole slides from 18 pediatric inflammatory bowel disease (IBD) patients. Slide section scans are provided as-is without any initial image pre-processing, normalization, or cropping. Labels are provided at the patient, slide (anatomic site), and section (tissue slice) levels. Each slide is labelled with biopsy site and normal or abnormal classification per the surgical pathology report. Each tissue section scan from an abnormal slide is further classified as normal or abnormal by pathologist. Files may be viewed and annotated using standard, opensource slide-viewing software, such as Aperio ImageScope, OpenSlide​​, TiffSlide, and QuPath​​.

Technical Details

Scans of H&E-stained histology slides of biopsied tissue from endoscopy. Captured with MikroScan SL5 in SVS TIFF format with .tif file extension.

Biological Sources
NCBI Organism Classification
Homo sapiens
Biological Context
Biological Process
Pediatric Inflamatory Bowel Disease
Attribution
Names
Chloe Martin-King
Ali Nael
Louis Ehwerhemuepha
Blake Calvo
Quinn Gates
Jamie Janchoi
Elisa Ornelas
Melissa Perez
Andrea Venderby
John Miklavcic
Peter Chang
Kenneth Grant
Link
CHOC Research Institute - Children's Hospital...
Pediatric IBD Structured Data
OTHER
P20483_patient_10
Grouping This image is part of a group.
Imaging
Image Mode
Static digital pathology tissue scans
Visualization Methods
Hematoxylin and eosin